NeuralEE
latest
Contents:
NeuralEE
Package Reference:
neuralee.dataset package
neuralee.embedding package
neuralee._aux package
NeuralEE
Docs
»
Index
Edit on GitHub
Index
A
|
B
|
C
|
D
|
E
|
F
|
G
|
H
|
L
|
M
|
N
|
P
|
R
|
S
|
U
|
X
A
affinity() (neuralee.dataset.GeneExpressionDataset method)
affinity_split() (neuralee.dataset.GeneExpressionDataset method)
AnnDataset (class in neuralee.dataset)
B
BrainLargeDataset (class in neuralee.dataset)
BrainSmallDataset (class in neuralee.dataset)
BreastCancerDataset (class in neuralee.dataset)
C
CbmcDataset (class in neuralee.dataset)
CiteSeqDataset (class in neuralee.dataset)
concat_datasets() (neuralee.dataset.GeneExpressionDataset static method)
CortexDataset (class in neuralee.dataset)
CsvDataset (class in neuralee.dataset)
D
D (neuralee.embedding.NeuralEE attribute)
Dataset10X (class in neuralee.dataset)
download() (neuralee.dataset.GeneExpressionDataset method)
download_and_preprocess() (neuralee.dataset.GeneExpressionDataset method)
E
ea() (in module neuralee._aux)
EE() (neuralee.embedding.NeuralEE method)
eloss() (in module neuralee._aux)
error_ee() (in module neuralee._aux)
error_ee_split() (in module neuralee._aux)
F
FCLayers (class in neuralee.embedding)
filter_cell_types() (neuralee.dataset.GeneExpressionDataset method)
filter_genes() (neuralee.dataset.GeneExpressionDataset method)
fine_tune() (neuralee.embedding.NeuralEE method)
forward() (neuralee.embedding.FCLayers method)
G
GeneExpressionDataset (class in neuralee.dataset)
get_attributes_from_list() (neuralee.dataset.GeneExpressionDataset static method)
get_attributes_from_matrix() (neuralee.dataset.GeneExpressionDataset static method)
H
HematoDataset (class in neuralee.dataset)
L
labels (neuralee.embedding.NeuralEE attribute)
log_shift() (neuralee.dataset.GeneExpressionDataset method)
LoomDataset (class in neuralee.dataset)
ls_ee() (in module neuralee._aux)
M
map() (neuralee.embedding.NeuralEE method)
map_cell_types() (neuralee.dataset.GeneExpressionDataset method)
merge_cell_types() (neuralee.dataset.GeneExpressionDataset method)
MouseOBDataset (class in neuralee.dataset)
N
NeuralEE (class in neuralee.embedding)
neuralee._aux (module)
neuralee.dataset (module)
neuralee.embedding (module)
P
PbmcDataset (class in neuralee.dataset)
preprocess() (neuralee.dataset.AnnDataset method)
(neuralee.dataset.BrainLargeDataset method)
(neuralee.dataset.CiteSeqDataset method)
(neuralee.dataset.CortexDataset method)
(neuralee.dataset.CsvDataset method)
(neuralee.dataset.Dataset10X method)
(neuralee.dataset.HematoDataset method)
(neuralee.dataset.LoomDataset method)
(neuralee.dataset.SeqfishDataset method)
(neuralee.dataset.SmfishDataset method)
PurifiedPBMCDataset (class in neuralee.dataset)
R
remove_zero_sample() (neuralee.dataset.GeneExpressionDataset method)
reorder_genes() (neuralee.dataset.CortexDataset static method)
RetinaDataset (class in neuralee.dataset)
S
scatter() (in module neuralee._aux)
scatter_with_colorbar() (in module neuralee._aux)
SeqfishDataset (class in neuralee.dataset)
SmfishDataset (class in neuralee.dataset)
standardscale() (neuralee.dataset.GeneExpressionDataset method)
subsample_cells() (neuralee.dataset.GeneExpressionDataset method)
subsample_genes() (neuralee.dataset.GeneExpressionDataset method)
U
update_cells() (neuralee.dataset.GeneExpressionDataset method)
update_genes() (neuralee.dataset.GeneExpressionDataset method)
X
x2p() (in module neuralee._aux)
Read the Docs
v: latest
Versions
latest
stable
v0.1.6
Downloads
pdf
html
epub
On Read the Docs
Project Home
Builds
Free document hosting provided by
Read the Docs
.